Right! So I guess a good question to start out with is what sort of powers the legislature would need in order to function - so for example, they'd need people who are experts on the issues at hand and they'd need people who represent those being governed (in a democratic system, at least).
It'd also be important to ask who they'd appoint as delegates for each chamber. For example, in the UK you have the elected house of Commons and the appointed house of Lords, which necessarily means the house of Commons ends up having a more important role than the house of Lords in today's modern society since people feel those delegates have more accountability.
(I'm sorry this is all pretty vague, but I feel like the issues going on in your country would shape the way it's being governed. The special powers should definitely be tailored either to what the country needs, or what the country needed in the past, or what the country thought it needed in the past.)